Publications

2026

  1. Gastroenterology
    Uncovering the dynamics of mucosa-associated microbiota in post-operative recurrence of Crohn’s disease
    Léonard Dubois, Alexandre Chaussard, Philippe Seksik, Stéphane Nancey, and 21 more authors
    Gastroenterology, 2026
    DOI
  2. ICML
    Independent Component Discovery in Temporal Count Data
    Alexandre Chaussard, Anna Bonnet, and Sylvain Le Corff
    arXiv, 2026
    Accepted at ICML 2026
    arXiv

2025

  1. Stats. & Comp.
    Tree-based variational inference for Poisson log-normal models
    Alexandre Chaussard, Anna Bonnet, Elisabeth Gassiat, and Sylvain Le Corff
    Statistics and Computing, 2025
    DOI arXiv
  2. BMC Bioinfo.
    TaxaPLN: a taxonomy-aware augmentation strategy for microbiome-trait classification including metadata
    Alexandre Chaussard, Anna Bonnet, Sylvain Le Corff, and Harry Sokol
    BMC Bioinformatics, 2025
    DOI